Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 AC233992.3-201ENST00000607491 485 ntBASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 AL136162.1-201ENST00000607711 1078 ntBASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL55Q7Z7F7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 AC135279.3-201ENST00000610945 1311 ntBASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 FEM1AP4-201ENST00000443167 1987 ntBASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MRPL55Q7Z7F7 AIRN-201ENST00000601203 4374 ntBASIC13.46□□□□□ -0.26
MRPL55Q7Z7F7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
MRPL55Q7Z7F7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL55Q7Z7F7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MRPL55Q7Z7F7 AC008406.3-201ENST00000620001 1374 ntBASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 AC003102.1-202ENST00000563394 1796 ntBASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 AL024507.2-201ENST00000606070 2574 ntBASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 AC024257.2-201ENST00000549699 147 ntBASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL55Q7Z7F7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 AP006587.3-201ENST00000525742 1516 ntBASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL55Q7Z7F7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms