Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 AC124016.1-201ENST00000609552 612 ntBASIC11.42□□□□□ -0.58
RNF213Q63HN8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RNF213Q63HN8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RNF213Q63HN8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RNF213Q63HN8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.42□□□□□ -0.58
RNF213Q63HN8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 POM121L13P-201ENST00000422362 380 ntBASIC11.41□□□□□ -0.58
RNF213Q63HN8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 AC145676.1-201ENST00000514988 2004 ntBASIC11.41□□□□□ -0.58
RNF213Q63HN8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RNF213Q63HN8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC11.41□□□□□ -0.58
RNF213Q63HN8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RNF213Q63HN8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RNF213Q63HN8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RNF213Q63HN8 AC060766.5-201ENST00000590539 871 ntBASIC11.4□□□□□ -0.58
RNF213Q63HN8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RNF213Q63HN8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RNF213Q63HN8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 AL031133.1-201ENST00000406807 723 ntBASIC11.4□□□□□ -0.58
RNF213Q63HN8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 KRT18P20-201ENST00000548986 1279 ntBASIC11.4□□□□□ -0.58
RNF213Q63HN8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RNF213Q63HN8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RNF213Q63HN8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 AC091076.1-201ENST00000610741 619 ntBASIC11.39□□□□□ -0.59
RNF213Q63HN8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 AC246785.2-201ENST00000432512 513 ntBASIC11.39□□□□□ -0.59
RNF213Q63HN8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF213Q63HN8 HCG4P8-203ENST00000443049 980 ntBASIC11.39□□□□□ -0.59
RNF213Q63HN8 AC092183.1-201ENST00000469884 875 ntBASIC11.39□□□□□ -0.59
RNF213Q63HN8 AL358472.4-201ENST00000633140 710 ntBASIC11.39□□□□□ -0.59
RNF213Q63HN8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF213Q63HN8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
RNF213Q63HN8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF213Q63HN8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms