Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEPDC1Q5TB30 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DEPDC1Q5TB30 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.3■□□□□ 0.84
DEPDC1Q5TB30 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.29■□□□□ 0.84
DEPDC1Q5TB30 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 TPRG1LP1-201ENST00000598702 760 ntBASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 MIR6084-201ENST00000622012 110 ntBASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 AL137060.1-201ENST00000618151 2648 ntBASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DEPDC1Q5TB30 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DEPDC1Q5TB30 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DEPDC1Q5TB30 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DEPDC1Q5TB30 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DEPDC1Q5TB30 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.27■□□□□ 0.83
DEPDC1Q5TB30 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.26■□□□□ 0.83
DEPDC1Q5TB30 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms