Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RBM17P2-201ENST00000616397 1405 ntBASIC11.72□□□□□ -0.53
UBR4Q5T4S7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 CR769767.2-201ENST00000622735 460 ntBASIC11.72□□□□□ -0.53
UBR4Q5T4S7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 AC004687.1-201ENST00000579003 1625 ntBASIC11.72□□□□□ -0.53
UBR4Q5T4S7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 AP000550.4-202ENST00000639755 178 ntBASIC11.71□□□□□ -0.53
UBR4Q5T4S7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UBR4Q5T4S7 HLA-L-211ENST00000482052 1765 ntBASIC11.71□□□□□ -0.54
UBR4Q5T4S7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 KRT18P20-201ENST00000548986 1279 ntBASIC11.71□□□□□ -0.54
UBR4Q5T4S7 AC087633.2-202ENST00000565166 1439 ntBASIC11.71□□□□□ -0.54
UBR4Q5T4S7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.71□□□□□ -0.54
UBR4Q5T4S7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 AC138907.5-202ENST00000569484 235 ntBASIC11.7□□□□□ -0.54
UBR4Q5T4S7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.7□□□□□ -0.54
UBR4Q5T4S7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 AC145676.1-201ENST00000514988 2004 ntBASIC11.69□□□□□ -0.54
UBR4Q5T4S7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.69□□□□□ -0.54
UBR4Q5T4S7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 AC027702.1-201ENST00000563810 1770 ntBASIC11.68□□□□□ -0.54
UBR4Q5T4S7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 AC135731.1-201ENST00000569415 2548 ntBASIC11.68□□□□□ -0.54
UBR4Q5T4S7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms