Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRIF1Q5T3J3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRIF1Q5T3J3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 AC009237.3-201ENST00000393279 1427 ntBASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 MIR4767-201ENST00000582827 78 ntBASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 AC055733.4-201ENST00000638462 1354 ntBASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRIF1Q5T3J3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 AC233992.3-201ENST00000607491 485 ntBASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIF1Q5T3J3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 AC073314.1-201ENST00000568729 2216 ntBASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 AC092667.1-201ENST00000434301 2586 ntBASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIF1Q5T3J3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.77■□□□□ 0.76
LRIF1Q5T3J3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms