Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01554Q52M75 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01554Q52M75 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01554Q52M75 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01554Q52M75 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01554Q52M75 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
LINC01554Q52M75 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01554Q52M75 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01554Q52M75 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01554Q52M75 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 AC141586.4-201ENST00000624558 1573 ntBASIC10.53□□□□□ -0.72
LINC01554Q52M75 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 MIR3960-201ENST00000583311 91 ntBASIC10.53□□□□□ -0.72
LINC01554Q52M75 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 AC016575.1-201ENST00000607026 382 ntBASIC10.53□□□□□ -0.72
LINC01554Q52M75 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 LSR-203ENST00000360798 1963 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01554Q52M75 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01554Q52M75 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01554Q52M75 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01554Q52M75 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01554Q52M75 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01554Q52M75 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01554Q52M75 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01554Q52M75 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 TPT1-202ENST00000379055 948 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 ECEL1P1-201ENST00000373592 1742 ntBASIC10.52□□□□□ -0.73
LINC01554Q52M75 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01554Q52M75 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01554Q52M75 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC10.51□□□□□ -0.73
LINC01554Q52M75 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01554Q52M75 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC01554Q52M75 AL133373.2-201ENST00000623187 2828 ntBASIC10.51□□□□□ -0.73
LINC01554Q52M75 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms