Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 AC027612.3-201ENST00000413684 1047 ntBASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAI3Q3KNW1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 ZNRF2P3-201ENST00000424200 374 ntBASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 EEF1DP3-203ENST00000566025 782 ntBASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAI3Q3KNW1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 AC079140.4-201ENST00000507448 529 ntBASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SNAI3Q3KNW1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 AC053503.5-201ENST00000601508 636 ntBASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAI3Q3KNW1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAI3Q3KNW1 LINC02228-203ENST00000641970 1355 ntBASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 KRT87P-202ENST00000534226 1464 ntBASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.17■□□□□ 0.5
SNAI3Q3KNW1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms