Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.04■□□□□ 0.8
GABREP78334 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GABREP78334 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.04■□□□□ 0.8
GABREP78334 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.04■□□□□ 0.8
GABREP78334 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
GABREP78334 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
GABREP78334 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.04■□□□□ 0.8
GABREP78334 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GABREP78334 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.04■□□□□ 0.8
GABREP78334 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GABREP78334 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GABREP78334 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.03■□□□□ 0.8
GABREP78334 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.03■□□□□ 0.8
GABREP78334 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.03■□□□□ 0.8
GABREP78334 AC243732.1-201ENST00000612648 864 ntBASIC20.03■□□□□ 0.8
GABREP78334 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GABREP78334 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.03■□□□□ 0.8
GABREP78334 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.03■□□□□ 0.8
GABREP78334 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
GABREP78334 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.02■□□□□ 0.8
GABREP78334 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GABREP78334 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.02■□□□□ 0.8
GABREP78334 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.02■□□□□ 0.8
GABREP78334 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.02■□□□□ 0.8
GABREP78334 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.02■□□□□ 0.8
GABREP78334 AC008550.1-201ENST00000511500 884 ntBASIC20.02■□□□□ 0.8
GABREP78334 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
GABREP78334 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.02■□□□□ 0.8
GABREP78334 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.02■□□□□ 0.8
GABREP78334 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
GABREP78334 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.02■□□□□ 0.8
GABREP78334 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.02■□□□□ 0.8
GABREP78334 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABREP78334 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GABREP78334 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
GABREP78334 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABREP78334 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.01■□□□□ 0.79
GABREP78334 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.01■□□□□ 0.79
GABREP78334 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABREP78334 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GABREP78334 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GABREP78334 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.01■□□□□ 0.79
GABREP78334 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
GABREP78334 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20■□□□□ 0.79
GABREP78334 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20■□□□□ 0.79
GABREP78334 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20■□□□□ 0.79
GABREP78334 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABREP78334 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20■□□□□ 0.79
GABREP78334 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.99■□□□□ 0.79
GABREP78334 UBE2SP1-201ENST00000450587 669 ntBASIC19.99■□□□□ 0.79
GABREP78334 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.99■□□□□ 0.79
GABREP78334 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GABREP78334 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABREP78334 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABREP78334 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
GABREP78334 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.98■□□□□ 0.79
GABREP78334 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABREP78334 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
GABREP78334 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
GABREP78334 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABREP78334 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GABREP78334 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GABREP78334 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.98■□□□□ 0.79
GABREP78334 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GABREP78334 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABREP78334 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms