Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.84■□□□□ 0.61
VBP1P61758 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.84■□□□□ 0.61
VBP1P61758 PLK5-205ENST00000642079 1969 ntBASIC18.84■□□□□ 0.61
VBP1P61758 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.84■□□□□ 0.61
VBP1P61758 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VBP1P61758 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VBP1P61758 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
VBP1P61758 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
VBP1P61758 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VBP1P61758 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VBP1P61758 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.83■□□□□ 0.61
VBP1P61758 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
VBP1P61758 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VBP1P61758 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VBP1P61758 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
VBP1P61758 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VBP1P61758 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.83■□□□□ 0.6
VBP1P61758 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.83■□□□□ 0.6
VBP1P61758 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
VBP1P61758 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VBP1P61758 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VBP1P61758 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VBP1P61758 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VBP1P61758 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.83■□□□□ 0.6
VBP1P61758 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VBP1P61758 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VBP1P61758 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.83■□□□□ 0.6
VBP1P61758 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.82■□□□□ 0.6
VBP1P61758 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.82■□□□□ 0.6
VBP1P61758 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.82■□□□□ 0.6
VBP1P61758 MIR4281-201ENST00000580852 62 ntBASIC18.82■□□□□ 0.6
VBP1P61758 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.82■□□□□ 0.6
VBP1P61758 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.82■□□□□ 0.6
VBP1P61758 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
VBP1P61758 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
VBP1P61758 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VBP1P61758 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VBP1P61758 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
VBP1P61758 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.81■□□□□ 0.6
VBP1P61758 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 GPX1-201ENST00000419349 1106 ntBASIC18.81■□□□□ 0.6
VBP1P61758 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
VBP1P61758 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.81■□□□□ 0.6
VBP1P61758 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VBP1P61758 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.81■□□□□ 0.6
VBP1P61758 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.81■□□□□ 0.6
VBP1P61758 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VBP1P61758 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.8■□□□□ 0.6
VBP1P61758 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VBP1P61758 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.8■□□□□ 0.6
VBP1P61758 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VBP1P61758 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.8■□□□□ 0.6
VBP1P61758 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VBP1P61758 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VBP1P61758 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VBP1P61758 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.8■□□□□ 0.6
VBP1P61758 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.8■□□□□ 0.6
VBP1P61758 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VBP1P61758 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VBP1P61758 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.8■□□□□ 0.6
VBP1P61758 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VBP1P61758 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VBP1P61758 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VBP1P61758 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms