Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDX1P52945 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.41■□□□□ 0.86
PDX1P52945 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.41■□□□□ 0.86
PDX1P52945 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.41■□□□□ 0.86
PDX1P52945 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDX1P52945 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 AC080038.3-201ENST00000623346 1952 ntBASIC20.41■□□□□ 0.86
PDX1P52945 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PDX1P52945 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.41■□□□□ 0.86
PDX1P52945 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDX1P52945 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.4■□□□□ 0.86
PDX1P52945 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.4■□□□□ 0.86
PDX1P52945 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
PDX1P52945 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.4■□□□□ 0.86
PDX1P52945 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.4■□□□□ 0.86
PDX1P52945 MIPEPP3-201ENST00000412105 444 ntBASIC20.4■□□□□ 0.86
PDX1P52945 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.4■□□□□ 0.86
PDX1P52945 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PDX1P52945 AC093787.1-201ENST00000450396 207 ntBASIC20.4■□□□□ 0.86
PDX1P52945 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.4■□□□□ 0.86
PDX1P52945 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDX1P52945 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDX1P52945 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.39■□□□□ 0.86
PDX1P52945 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDX1P52945 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.39■□□□□ 0.86
PDX1P52945 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDX1P52945 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDX1P52945 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDX1P52945 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PDX1P52945 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.39■□□□□ 0.85
PDX1P52945 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.39■□□□□ 0.85
PDX1P52945 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.39■□□□□ 0.85
PDX1P52945 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDX1P52945 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDX1P52945 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 MKRN4P-201ENST00000444706 1521 ntBASIC20.38■□□□□ 0.85
PDX1P52945 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PDX1P52945 FAM201B-201ENST00000458407 597 ntBASIC20.38■□□□□ 0.85
PDX1P52945 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 MIR4758-201ENST00000577688 71 ntBASIC20.38■□□□□ 0.85
PDX1P52945 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PDX1P52945 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDX1P52945 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.38■□□□□ 0.85
PDX1P52945 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.37■□□□□ 0.85
PDX1P52945 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDX1P52945 AC139530.1-201ENST00000575312 1977 ntBASIC20.37■□□□□ 0.85
PDX1P52945 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PDX1P52945 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDX1P52945 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDX1P52945 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDX1P52945 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDX1P52945 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDX1P52945 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDX1P52945 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDX1P52945 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDX1P52945 AC137767.1-201ENST00000602918 1920 ntBASIC20.36■□□□□ 0.85
PDX1P52945 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms