Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A1P52655 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A1P52655 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A1P52655 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A1P52655 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A1P52655 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
GTF2A1P52655 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A1P52655 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.58■□□□□ 0.89
GTF2A1P52655 AC116562.4-201ENST00000641316 2276 ntBASIC20.58■□□□□ 0.88
GTF2A1P52655 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
GTF2A1P52655 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A1P52655 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A1P52655 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A1P52655 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.58■□□□□ 0.88
GTF2A1P52655 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GTF2A1P52655 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A1P52655 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GTF2A1P52655 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 SMPD5-203ENST00000639008 1464 ntBASIC20.57■□□□□ 0.88
GTF2A1P52655 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF2A1P52655 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.57■□□□□ 0.88
GTF2A1P52655 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GTF2A1P52655 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF2A1P52655 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GTF2A1P52655 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A1P52655 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.57■□□□□ 0.88
GTF2A1P52655 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
GTF2A1P52655 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
GTF2A1P52655 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GTF2A1P52655 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
GTF2A1P52655 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GTF2A1P52655 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A1P52655 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 AC060814.1-201ENST00000554326 538 ntBASIC20.56■□□□□ 0.88
GTF2A1P52655 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.56■□□□□ 0.88
GTF2A1P52655 AC016575.1-201ENST00000607026 382 ntBASIC20.56■□□□□ 0.88
GTF2A1P52655 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A1P52655 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GTF2A1P52655 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
GTF2A1P52655 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A1P52655 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
GTF2A1P52655 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.55■□□□□ 0.88
GTF2A1P52655 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A1P52655 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
GTF2A1P52655 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
GTF2A1P52655 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A1P52655 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.55■□□□□ 0.88
GTF2A1P52655 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
GTF2A1P52655 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A1P52655 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.55■□□□□ 0.88
GTF2A1P52655 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GTF2A1P52655 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GTF2A1P52655 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.54■□□□□ 0.88
GTF2A1P52655 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
GTF2A1P52655 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GTF2A1P52655 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A1P52655 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A1P52655 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.53■□□□□ 0.88
GTF2A1P52655 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
GTF2A1P52655 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GTF2A1P52655 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A1P52655 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF2A1P52655 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF2A1P52655 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF2A1P52655 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF2A1P52655 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF2A1P52655 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
GTF2A1P52655 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms