Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCR9P51686 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCR9P51686 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCR9P51686 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCR9P51686 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.46■□□□□ 0.55
CCR9P51686 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CCR9P51686 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCR9P51686 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.45■□□□□ 0.54
CCR9P51686 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.45■□□□□ 0.54
CCR9P51686 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.45■□□□□ 0.54
CCR9P51686 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 FEM1AP1-201ENST00000431297 1995 ntBASIC18.45■□□□□ 0.54
CCR9P51686 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCR9P51686 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.45■□□□□ 0.54
CCR9P51686 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.45■□□□□ 0.54
CCR9P51686 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCR9P51686 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCR9P51686 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CCR9P51686 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCR9P51686 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.44■□□□□ 0.54
CCR9P51686 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCR9P51686 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.44■□□□□ 0.54
CCR9P51686 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCR9P51686 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.44■□□□□ 0.54
CCR9P51686 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.44■□□□□ 0.54
CCR9P51686 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.44■□□□□ 0.54
CCR9P51686 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCR9P51686 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCR9P51686 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.43■□□□□ 0.54
CCR9P51686 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
CCR9P51686 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCR9P51686 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.43■□□□□ 0.54
CCR9P51686 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.43■□□□□ 0.54
CCR9P51686 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.43■□□□□ 0.54
CCR9P51686 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CCR9P51686 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.43■□□□□ 0.54
CCR9P51686 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCR9P51686 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCR9P51686 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCR9P51686 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.42■□□□□ 0.54
CCR9P51686 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.42■□□□□ 0.54
CCR9P51686 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CCR9P51686 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCR9P51686 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.42■□□□□ 0.54
CCR9P51686 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.42■□□□□ 0.54
CCR9P51686 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.42■□□□□ 0.54
CCR9P51686 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.42■□□□□ 0.54
CCR9P51686 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCR9P51686 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.42■□□□□ 0.54
CCR9P51686 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCR9P51686 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.41■□□□□ 0.54
CCR9P51686 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCR9P51686 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms