Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL5P42830 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL5P42830 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CXCL5P42830 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
CXCL5P42830 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCL5P42830 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL5P42830 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL5P42830 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.11□□□□□ -0.15
CXCL5P42830 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL5P42830 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCL5P42830 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCL5P42830 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL5P42830 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL5P42830 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CXCL5P42830 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CXCL5P42830 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CXCL5P42830 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL5P42830 AL049796.1-201ENST00000565336 1766 ntBASIC14.1□□□□□ -0.15
CXCL5P42830 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 AC239859.2-201ENST00000444165 318 ntBASIC14.1□□□□□ -0.15
CXCL5P42830 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL5P42830 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL5P42830 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CXCL5P42830 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL5P42830 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CXCL5P42830 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL5P42830 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL5P42830 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CXCL5P42830 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.09□□□□□ -0.15
CXCL5P42830 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL5P42830 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CXCL5P42830 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL5P42830 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL5P42830 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL5P42830 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL5P42830 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL5P42830 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.08□□□□□ -0.15
CXCL5P42830 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL5P42830 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CXCL5P42830 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CXCL5P42830 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL5P42830 AC026471.6-201ENST00000622954 1905 ntBASIC14.08□□□□□ -0.16
CXCL5P42830 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CXCL5P42830 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.08□□□□□ -0.16
CXCL5P42830 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL5P42830 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL5P42830 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCL5P42830 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL5P42830 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCL5P42830 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL5P42830 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL5P42830 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL5P42830 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CXCL5P42830 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.07□□□□□ -0.16
CXCL5P42830 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL5P42830 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL5P42830 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CXCL5P42830 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms