Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HADHAP40939 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.22■□□□□ 0.99
HADHAP40939 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HADHAP40939 AC123595.1-201ENST00000440769 1046 ntBASIC21.22■□□□□ 0.99
HADHAP40939 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HADHAP40939 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HADHAP40939 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.22■□□□□ 0.99
HADHAP40939 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HADHAP40939 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.22■□□□□ 0.99
HADHAP40939 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
HADHAP40939 LINC02228-203ENST00000641970 1355 ntBASIC21.22■□□□□ 0.99
HADHAP40939 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.21■□□□□ 0.99
HADHAP40939 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HADHAP40939 AL024507.2-201ENST00000606070 2574 ntBASIC21.21■□□□□ 0.99
HADHAP40939 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.21■□□□□ 0.99
HADHAP40939 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.21■□□□□ 0.99
HADHAP40939 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.21■□□□□ 0.99
HADHAP40939 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.21■□□□□ 0.99
HADHAP40939 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HADHAP40939 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
HADHAP40939 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.21■□□□□ 0.99
HADHAP40939 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
HADHAP40939 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HADHAP40939 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HADHAP40939 YBX1P1-201ENST00000445822 960 ntBASIC21.2■□□□□ 0.98
HADHAP40939 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHAP40939 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.2■□□□□ 0.98
HADHAP40939 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.2■□□□□ 0.98
HADHAP40939 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHAP40939 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHAP40939 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHAP40939 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HADHAP40939 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
HADHAP40939 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HADHAP40939 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HADHAP40939 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HADHAP40939 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHAP40939 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHAP40939 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HADHAP40939 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.19■□□□□ 0.98
HADHAP40939 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHAP40939 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.19■□□□□ 0.98
HADHAP40939 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HADHAP40939 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HADHAP40939 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HADHAP40939 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHAP40939 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHAP40939 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHAP40939 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HADHAP40939 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HADHAP40939 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHAP40939 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.18■□□□□ 0.98
HADHAP40939 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.18■□□□□ 0.98
HADHAP40939 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HADHAP40939 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHAP40939 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.18■□□□□ 0.98
HADHAP40939 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HADHAP40939 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 RARRES2P6-201ENST00000567333 442 ntBASIC21.17■□□□□ 0.98
HADHAP40939 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.17■□□□□ 0.98
HADHAP40939 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HADHAP40939 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.17■□□□□ 0.98
HADHAP40939 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HADHAP40939 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.17■□□□□ 0.98
HADHAP40939 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HADHAP40939 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HADHAP40939 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HADHAP40939 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HADHAP40939 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHAP40939 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HADHAP40939 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.16■□□□□ 0.98
HADHAP40939 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HADHAP40939 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HADHAP40939 AC079140.4-201ENST00000507448 529 ntBASIC21.16■□□□□ 0.98
HADHAP40939 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.16■□□□□ 0.98
HADHAP40939 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.16■□□□□ 0.98
HADHAP40939 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.16■□□□□ 0.98
HADHAP40939 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms