Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL13AP40429 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL13AP40429 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL13AP40429 AC009831.1-201ENST00000580420 1582 ntBASIC14.51□□□□□ -0.09
RPL13AP40429 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL13AP40429 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL13AP40429 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL13AP40429 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RPL13AP40429 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RPL13AP40429 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
RPL13AP40429 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RPL13AP40429 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RPL13AP40429 AC026202.3-201ENST00000600805 1127 ntBASIC14.5□□□□□ -0.09
RPL13AP40429 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL13AP40429 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RPL13AP40429 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RPL13AP40429 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RPL13AP40429 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RPL13AP40429 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RPL13AP40429 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RPL13AP40429 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RPL13AP40429 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.49□□□□□ -0.09
RPL13AP40429 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RPL13AP40429 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.49□□□□□ -0.09
RPL13AP40429 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RPL13AP40429 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.48□□□□□ -0.09
RPL13AP40429 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.48□□□□□ -0.09
RPL13AP40429 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 AL020996.1-203ENST00000536896 2307 ntBASIC14.48□□□□□ -0.09
RPL13AP40429 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.48□□□□□ -0.09
RPL13AP40429 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
RPL13AP40429 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.48□□□□□ -0.09
RPL13AP40429 AL592293.1-201ENST00000502889 1188 ntBASIC14.48□□□□□ -0.09
RPL13AP40429 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RPL13AP40429 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RPL13AP40429 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RPL13AP40429 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RPL13AP40429 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
RPL13AP40429 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC14.48□□□□□ -0.09
RPL13AP40429 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.48□□□□□ -0.09
RPL13AP40429 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RPL13AP40429 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.47□□□□□ -0.09
RPL13AP40429 AC244015.2-201ENST00000616358 1861 ntBASIC14.47□□□□□ -0.09
RPL13AP40429 KRT18P10-201ENST00000388836 1287 ntBASIC14.47□□□□□ -0.09
RPL13AP40429 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.47□□□□□ -0.09
RPL13AP40429 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
RPL13AP40429 ATP5G2P3-201ENST00000429083 425 ntBASIC14.47□□□□□ -0.09
RPL13AP40429 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.47□□□□□ -0.09
RPL13AP40429 AC018755.3-202ENST00000596210 929 ntBASIC14.47□□□□□ -0.09
RPL13AP40429 RAP2CP1-202ENST00000605179 643 ntBASIC14.47□□□□□ -0.09
RPL13AP40429 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RPL13AP40429 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RPL13AP40429 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms