Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT20P35900 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT20P35900 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT20P35900 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT20P35900 AC012414.1-201ENST00000556676 535 ntBASIC19.89■□□□□ 0.77
KRT20P35900 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT20P35900 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT20P35900 AC019069.1-201ENST00000610008 1333 ntBASIC19.89■□□□□ 0.77
KRT20P35900 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT20P35900 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT20P35900 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT20P35900 AP004607.7-201ENST00000527152 1677 ntBASIC19.88■□□□□ 0.77
KRT20P35900 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.88■□□□□ 0.77
KRT20P35900 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.88■□□□□ 0.77
KRT20P35900 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT20P35900 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KRT20P35900 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT20P35900 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KRT20P35900 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT20P35900 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT20P35900 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT20P35900 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT20P35900 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT20P35900 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 AL121603.2-201ENST00000557373 2117 ntBASIC19.87■□□□□ 0.77
KRT20P35900 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
KRT20P35900 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT20P35900 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT20P35900 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT20P35900 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT20P35900 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KRT20P35900 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT20P35900 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT20P35900 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT20P35900 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT20P35900 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT20P35900 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT20P35900 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KRT20P35900 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT20P35900 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.85■□□□□ 0.77
KRT20P35900 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT20P35900 AL157384.1-201ENST00000445995 2473 ntBASIC19.85■□□□□ 0.77
KRT20P35900 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KRT20P35900 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
KRT20P35900 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT20P35900 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KRT20P35900 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KRT20P35900 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.84■□□□□ 0.77
KRT20P35900 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 ZNRF2P3-201ENST00000424200 374 ntBASIC19.84■□□□□ 0.77
KRT20P35900 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.84■□□□□ 0.77
KRT20P35900 BX005040.4-201ENST00000637145 1518 ntBASIC19.84■□□□□ 0.77
KRT20P35900 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms