Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC110285.6-201ENST00000617652 491 ntBASIC18.13■□□□□ 0.49
CCL1P22362 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCL1P22362 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.13■□□□□ 0.49
CCL1P22362 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.12■□□□□ 0.49
CCL1P22362 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 AF213884.3-201ENST00000563833 479 ntBASIC18.12■□□□□ 0.49
CCL1P22362 AL031432.3-201ENST00000607698 485 ntBASIC18.12■□□□□ 0.49
CCL1P22362 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCL1P22362 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCL1P22362 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.12■□□□□ 0.49
CCL1P22362 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCL1P22362 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCL1P22362 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCL1P22362 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.11■□□□□ 0.49
CCL1P22362 FEM1AP1-201ENST00000431297 1995 ntBASIC18.11■□□□□ 0.49
CCL1P22362 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.11■□□□□ 0.49
CCL1P22362 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCL1P22362 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCL1P22362 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL1P22362 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL1P22362 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.11■□□□□ 0.49
CCL1P22362 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.11■□□□□ 0.49
CCL1P22362 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL1P22362 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.11■□□□□ 0.49
CCL1P22362 AC012414.1-201ENST00000556676 535 ntBASIC18.11■□□□□ 0.49
CCL1P22362 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CCL1P22362 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL1P22362 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCL1P22362 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCL1P22362 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL1P22362 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CCL1P22362 PLK5-205ENST00000642079 1969 ntBASIC18.11■□□□□ 0.49
CCL1P22362 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL1P22362 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCL1P22362 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL1P22362 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL1P22362 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL1P22362 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL1P22362 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL1P22362 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL1P22362 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.1■□□□□ 0.49
CCL1P22362 EEF1DP3-203ENST00000566025 782 ntBASIC18.1■□□□□ 0.49
CCL1P22362 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL1P22362 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL1P22362 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL1P22362 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL1P22362 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.09■□□□□ 0.49
CCL1P22362 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.09■□□□□ 0.49
CCL1P22362 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.09■□□□□ 0.49
CCL1P22362 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
CCL1P22362 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCL1P22362 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.09■□□□□ 0.49
CCL1P22362 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.09■□□□□ 0.49
CCL1P22362 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.09■□□□□ 0.49
CCL1P22362 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.09■□□□□ 0.49
CCL1P22362 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.09■□□□□ 0.49
CCL1P22362 AC053503.5-201ENST00000601508 636 ntBASIC18.09■□□□□ 0.49
CCL1P22362 AL136967.2-201ENST00000623968 743 ntBASIC18.09■□□□□ 0.49
CCL1P22362 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
CCL1P22362 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL1P22362 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL1P22362 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCL1P22362 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL1P22362 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL1P22362 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL1P22362 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCL1P22362 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms