Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSR1P21757 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSR1P21757 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSR1P21757 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSR1P21757 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSR1P21757 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.56■□□□□ 0.56
MSR1P21757 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
MSR1P21757 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.56■□□□□ 0.56
MSR1P21757 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.56■□□□□ 0.56
MSR1P21757 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
MSR1P21757 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSR1P21757 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MSR1P21757 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.55■□□□□ 0.56
MSR1P21757 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.55■□□□□ 0.56
MSR1P21757 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.55■□□□□ 0.56
MSR1P21757 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.55■□□□□ 0.56
MSR1P21757 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.55■□□□□ 0.56
MSR1P21757 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSR1P21757 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.55■□□□□ 0.56
MSR1P21757 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MSR1P21757 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 AL024507.2-201ENST00000606070 2574 ntBASIC18.54■□□□□ 0.56
MSR1P21757 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSR1P21757 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSR1P21757 AC079140.4-201ENST00000507448 529 ntBASIC18.54■□□□□ 0.56
MSR1P21757 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.54■□□□□ 0.56
MSR1P21757 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.54■□□□□ 0.56
MSR1P21757 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.54■□□□□ 0.56
MSR1P21757 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
MSR1P21757 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSR1P21757 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
MSR1P21757 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
MSR1P21757 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.53■□□□□ 0.56
MSR1P21757 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MSR1P21757 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.53■□□□□ 0.56
MSR1P21757 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
MSR1P21757 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 LINC02228-203ENST00000641970 1355 ntBASIC18.53■□□□□ 0.56
MSR1P21757 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MSR1P21757 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MSR1P21757 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.52■□□□□ 0.56
MSR1P21757 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.52■□□□□ 0.56
MSR1P21757 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.52■□□□□ 0.56
MSR1P21757 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MSR1P21757 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.52■□□□□ 0.56
MSR1P21757 AC053503.5-201ENST00000601508 636 ntBASIC18.52■□□□□ 0.56
MSR1P21757 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.52■□□□□ 0.56
MSR1P21757 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.52■□□□□ 0.56
MSR1P21757 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MSR1P21757 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.52■□□□□ 0.55
MSR1P21757 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
MSR1P21757 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MSR1P21757 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MSR1P21757 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MSR1P21757 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MSR1P21757 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MSR1P21757 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.51■□□□□ 0.55
MSR1P21757 AF106564.1-201ENST00000607058 2553 ntBASIC18.51■□□□□ 0.55
MSR1P21757 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSR1P21757 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.51■□□□□ 0.55
MSR1P21757 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MSR1P21757 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.51■□□□□ 0.55
MSR1P21757 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MSR1P21757 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MSR1P21757 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MSR1P21757 AC123595.1-201ENST00000440769 1046 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms