Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ERCC2P18074 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC2P18074 AF106564.1-201ENST00000607058 2553 ntBASIC21.66■■□□□ 1.06
ERCC2P18074 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC2P18074 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ERCC2P18074 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.66■■□□□ 1.06
ERCC2P18074 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.66■■□□□ 1.06
ERCC2P18074 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ERCC2P18074 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.66■■□□□ 1.06
ERCC2P18074 KRT18P61-201ENST00000585825 1298 ntBASIC21.66■■□□□ 1.06
ERCC2P18074 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.66■■□□□ 1.06
ERCC2P18074 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ERCC2P18074 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC2P18074 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC2P18074 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ERCC2P18074 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ERCC2P18074 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 AC061975.6-201ENST00000579045 1553 ntBASIC21.65■■□□□ 1.06
ERCC2P18074 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ERCC2P18074 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ERCC2P18074 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ERCC2P18074 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.65■■□□□ 1.06
ERCC2P18074 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.65■■□□□ 1.06
ERCC2P18074 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ERCC2P18074 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ERCC2P18074 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ERCC2P18074 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ERCC2P18074 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ERCC2P18074 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.64■■□□□ 1.06
ERCC2P18074 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.64■■□□□ 1.05
ERCC2P18074 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.64■■□□□ 1.05
ERCC2P18074 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.64■■□□□ 1.05
ERCC2P18074 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.64■■□□□ 1.05
ERCC2P18074 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ERCC2P18074 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ERCC2P18074 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ERCC2P18074 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.64■■□□□ 1.05
ERCC2P18074 AC005229.4-201ENST00000610085 2198 ntBASIC21.64■■□□□ 1.05
ERCC2P18074 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
ERCC2P18074 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ERCC2P18074 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 AC010141.2-201ENST00000452426 721 ntBASIC21.63■■□□□ 1.05
ERCC2P18074 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.63■■□□□ 1.05
ERCC2P18074 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.63■■□□□ 1.05
ERCC2P18074 NTF6G-201ENST00000591094 616 ntBASIC21.63■■□□□ 1.05
ERCC2P18074 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.63■■□□□ 1.05
ERCC2P18074 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
ERCC2P18074 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.63■■□□□ 1.05
ERCC2P18074 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ERCC2P18074 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC2P18074 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC2P18074 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.62■■□□□ 1.05
ERCC2P18074 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC2P18074 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.62■■□□□ 1.05
ERCC2P18074 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.62■■□□□ 1.05
ERCC2P18074 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC2P18074 AC008175.2-201ENST00000612840 297 ntBASIC21.62■■□□□ 1.05
ERCC2P18074 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ERCC2P18074 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC2P18074 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ERCC2P18074 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC2P18074 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
ERCC2P18074 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ERCC2P18074 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.61■■□□□ 1.05
ERCC2P18074 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.61■■□□□ 1.05
ERCC2P18074 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.61■■□□□ 1.05
ERCC2P18074 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.61■■□□□ 1.05
ERCC2P18074 AP001160.3-201ENST00000601484 763 ntBASIC21.61■■□□□ 1.05
ERCC2P18074 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ERCC2P18074 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC2P18074 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC2P18074 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.6■■□□□ 1.05
ERCC2P18074 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ERCC2P18074 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.6■■□□□ 1.05
ERCC2P18074 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
ERCC2P18074 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms