Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DOBP13765 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DOBP13765 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DOBP13765 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DOBP13765 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DOBP13765 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.83■□□□□ 0.61
HLA-DOBP13765 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.83■□□□□ 0.61
HLA-DOBP13765 LINC02228-203ENST00000641970 1355 ntBASIC18.83■□□□□ 0.61
HLA-DOBP13765 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DOBP13765 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DOBP13765 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DOBP13765 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DOBP13765 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.83■□□□□ 0.61
HLA-DOBP13765 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DOBP13765 AC079140.4-201ENST00000507448 529 ntBASIC18.83■□□□□ 0.6
HLA-DOBP13765 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.83■□□□□ 0.6
HLA-DOBP13765 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DOBP13765 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DOBP13765 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DOBP13765 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DOBP13765 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DOBP13765 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 YBX1P1-201ENST00000445822 960 ntBASIC18.82■□□□□ 0.6
HLA-DOBP13765 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DOBP13765 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DOBP13765 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DOBP13765 EEF1DP3-203ENST00000566025 782 ntBASIC18.82■□□□□ 0.6
HLA-DOBP13765 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DOBP13765 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 AC123595.1-201ENST00000440769 1046 ntBASIC18.81■□□□□ 0.6
HLA-DOBP13765 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DOBP13765 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DOBP13765 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DOBP13765 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DOBP13765 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HLA-DOBP13765 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 CCDC92B-201ENST00000575506 885 ntBASIC18.8■□□□□ 0.6
HLA-DOBP13765 TERF1P2-201ENST00000583350 1212 ntBASIC18.8■□□□□ 0.6
HLA-DOBP13765 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DOBP13765 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOBP13765 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOBP13765 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HLA-DOBP13765 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOBP13765 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOBP13765 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOBP13765 AC053503.5-201ENST00000601508 636 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms