Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 CBLL1-203ENST00000420796 1506 ntTSL 513.95□□□□□ -0.183e-6■□□□□ 11
XRCC6P12956 ADAR-204ENST00000471068 577 ntTSL 413.09□□□□□ -0.313e-6■□□□□ 11
XRCC6P12956 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.373e-6■□□□□ 11
XRCC6P12956 CBLL1-205ENST00000440859 4432 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.393e-6■□□□□ 11
XRCC6P12956 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.43e-6■□□□□ 11
XRCC6P12956 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC12.39□□□□□ -0.433e-6■□□□□ 11
XRCC6P12956 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.453e-6■□□□□ 11
XRCC6P12956 CTBP2-212ENST00000530884 578 ntTSL 311.45□□□□□ -0.583e-6■□□□□ 11
XRCC6P12956 UPF2-204ENST00000460569 640 ntTSL 211.33□□□□□ -0.63e-6■□□□□ 11
XRCC6P12956 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC11.24□□□□□ -0.613e-6■□□□□ 11
XRCC6P12956 MOV10-217ENST00000496577 4312 ntTSL 210.9□□□□□ -0.663e-6■□□□□ 11
XRCC6P12956 MOV10-206ENST00000468624 4689 ntTSL 510.85□□□□□ -0.673e-6■□□□□ 11
XRCC6P12956 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC10.83□□□□□ -0.683e-6■□□□□ 11
XRCC6P12956 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)10.68□□□□□ -0.74e-7■□□□□ 11
XRCC6P12956 ADAR-203ENST00000463920 2347 ntTSL 210.46□□□□□ -0.743e-6■□□□□ 11
XRCC6P12956 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.783e-6■□□□□ 11
XRCC6P12956 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC9.77□□□□□ -0.853e-6■□□□□ 11
XRCC6P12956 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.983e-6■□□□□ 11
XRCC6P12956 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.123e-6■□□□□ 11
XRCC6P12956 RN7SKP130-201ENST00000364924 301 ntBASIC7.66□□□□□ -1.183e-6■□□□□ 11
XRCC6P12956 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.39□□□□□ -1.233e-6■□□□□ 11
XRCC6P12956 CBLL1-208ENST00000493361 587 ntTSL 37.25□□□□□ -1.253e-6■□□□□ 11
XRCC6P12956 CBLL1-204ENST00000432748 573 ntTSL 25.86□□□□□ -1.473e-6■□□□□ 11
XRCC6P12956 PARP2-206ENST00000529465 717 ntTSL 45.36□□□□□ -1.553e-6■□□□□ 11
XRCC6P12956 CBLL1-207ENST00000487517 560 ntTSL 34.74□□□□□ -1.653e-6■□□□□ 11
XRCC6P12956 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.32□□□□□ -1.723e-6■□□□□ 11
XRCC6P12956 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.813e-6■□□□□ 11
XRCC6P12956 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.833e-6■□□□□ 11
XRCC6P12956 PARP2-205ENST00000528465 551 ntTSL 53.03□□□□□ -1.923e-6■□□□□ 11
XRCC6P12956 HSP90AA1-208ENST00000557234 584 ntTSL 320.19■□□□□ 0.821e-10■□□□□ 11
XRCC6P12956 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.341e-10■□□□□ 11
XRCC6P12956 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC16.21■□□□□ 0.191e-10■□□□□ 11
XRCC6P12956 HSP90AA1-206ENST00000556554 552 ntTSL 27.17□□□□□ -1.261e-10■□□□□ 11
XRCC6P12956 HSP90AA1-203ENST00000553585 581 ntTSL 36.31□□□□□ -1.41e-10■□□□□ 11
XRCC6P12956 PGGHG-208ENST00000529087 745 ntTSL 220.08■□□□□ 0.811e-11■□□□□ 11
XRCC6P12956 CORO1C-216ENST00000551059 474 ntTSL 220.91■□□□□ 0.941e-6■□□□□ 11
XRCC6P12956 CORO1C-214ENST00000550542 1245 ntTSL 520.33■□□□□ 0.851e-6■□□□□ 11
XRCC6P12956 CORO1C-219ENST00000552871 587 ntTSL 320.33■□□□□ 0.851e-6■□□□□ 11
XRCC6P12956 CORO1C-210ENST00000549384 891 ntTSL 520.27■□□□□ 0.841e-6■□□□□ 11
XRCC6P12956 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.041e-6■□□□□ 11
XRCC6P12956 CORO1C-217ENST00000551550 547 ntTSL 410.82□□□□□ -0.681e-6■□□□□ 11
XRCC6P12956 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.88■■□□□ 1.414e-6■□□□□ 11
XRCC6P12956 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.294e-6■□□□□ 11
XRCC6P12956 ACAP3-206ENST00000467278 2725 ntTSL 1 (best)21.84■■□□□ 1.094e-6■□□□□ 11
XRCC6P12956 ACAP3-212ENST00000492936 5319 ntTSL 1 (best)20.25■□□□□ 0.834e-6■□□□□ 11
XRCC6P12956 RABL6-205ENST00000435930 3328 ntTSL 219.32■□□□□ 0.682e-8■□□□□ 11
XRCC6P12956 FBRSL1-204ENST00000539264 409 ntTSL 226.74■■□□□ 1.873e-7■□□□□ 10.9
XRCC6P12956 FBRSL1-207ENST00000543360 238 ntTSL 226.45■■□□□ 1.823e-7■□□□□ 10.9
XRCC6P12956 ATP2A2-203ENST00000377685 5702 ntTSL 524.95■■□□□ 1.583e-7■□□□□ 10.9
XRCC6P12956 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.093e-7■□□□□ 10.9
XRCC6P12956 SREBF1-206ENST00000423161 1058 ntTSL 320.51■□□□□ 0.873e-7■□□□□ 10.9
XRCC6P12956 SREBF1-211ENST00000476994 591 ntTSL 219.66■□□□□ 0.743e-7■□□□□ 10.9
XRCC6P12956 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.73e-7■□□□□ 10.9
XRCC6P12956 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.693e-7■□□□□ 10.9
XRCC6P12956 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.633e-7■□□□□ 10.9
XRCC6P12956 MLXIP-210ENST00000541750 2835 ntTSL 518.16■□□□□ 0.53e-7■□□□□ 10.9
XRCC6P12956 MLXIP-211ENST00000542417 513 ntTSL 217■□□□□ 0.313e-7■□□□□ 10.9
XRCC6P12956 SREBF1-222ENST00000583732 580 ntTSL 416.74■□□□□ 0.273e-7■□□□□ 10.9
XRCC6P12956 MLXIP-202ENST00000366272 1682 ntTSL 316.71■□□□□ 0.273e-7■□□□□ 10.9
XRCC6P12956 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-7■□□□□ 10.9
XRCC6P12956 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.85■□□□□ 0.133e-7■□□□□ 10.9
XRCC6P12956 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC13.13□□□□□ -0.313e-7■□□□□ 10.9
XRCC6P12956 ATP2A2-209ENST00000550248 544 ntTSL 49.16□□□□□ -0.943e-7■□□□□ 10.9
XRCC6P12956 ATP2A2-207ENST00000548169 2951 ntTSL 29.13□□□□□ -0.953e-7■□□□□ 10.9
XRCC6P12956 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC9.06□□□□□ -0.963e-7■□□□□ 10.9
XRCC6P12956 PHKB-216ENST00000568439 499 ntTSL 33.47□□□□□ -1.853e-7■□□□□ 10.9
XRCC6P12956 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.85■■□□□ 1.416e-6■□□□□ 10.9
XRCC6P12956 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.996e-6■□□□□ 10.9
XRCC6P12956 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.64■□□□□ 0.736e-6■□□□□ 10.9
XRCC6P12956 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.14■□□□□ 0.666e-6■□□□□ 10.9
XRCC6P12956 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.31■■□□□ 1.484e-6■□□□□ 10.9
XRCC6P12956 MIR210HG-202ENST00000528245 659 ntTSL 317.86■□□□□ 0.454e-6■□□□□ 10.9
XRCC6P12956 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.85■□□□□ 0.454e-6■□□□□ 10.9
XRCC6P12956 MIR210HG-204ENST00000534540 367 ntTSL 215.92■□□□□ 0.144e-6■□□□□ 10.9
XRCC6P12956 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.054e-8■□□□□ 10.9
XRCC6P12956 CDK10-212ENST00000510811 1376 ntTSL 220.41■□□□□ 0.864e-8■□□□□ 10.9
XRCC6P12956 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.15■□□□□ 0.824e-8■□□□□ 10.9
XRCC6P12956 CDK10-204ENST00000472018 2532 ntTSL 219.89■□□□□ 0.774e-8■□□□□ 10.9
XRCC6P12956 CDK10-209ENST00000505733 1703 ntTSL 219.83■□□□□ 0.774e-8■□□□□ 10.9
XRCC6P12956 CDK10-216ENST00000561477 535 ntTSL 317.19■□□□□ 0.344e-8■□□□□ 10.9
XRCC6P12956 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC14.58□□□□□ -0.084e-8■□□□□ 10.9
XRCC6P12956 CDK10-217ENST00000564192 897 ntTSL 514.11□□□□□ -0.154e-8■□□□□ 10.9
XRCC6P12956 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC10.49□□□□□ -0.734e-8■□□□□ 10.9
XRCC6P12956 TMEM259-204ENST00000586285 626 ntTSL 314.06□□□□□ -0.161e-15■□□□□ 10.8
XRCC6P12956 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.831e-14■□□□□ 10.8
XRCC6P12956 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.141e-14■□□□□ 10.8
XRCC6P12956 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.031e-14■□□□□ 10.8
XRCC6P12956 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.151e-14■□□□□ 10.8
XRCC6P12956 SLC39A14-211ENST00000522881 560 ntTSL 513.59□□□□□ -0.231e-14■□□□□ 10.8
XRCC6P12956 RPL4-207ENST00000564647 1110 ntTSL 27.15□□□□□ -1.261e-19■□□□□ 10.8
XRCC6P12956 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.29■■□□□ 1.647e-7■□□□□ 10.8
XRCC6P12956 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.722e-6■□□□□ 10.8
XRCC6P12956 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.462e-6■□□□□ 10.8
XRCC6P12956 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.93■■□□□ 1.422e-6■□□□□ 10.8
XRCC6P12956 PTP4A3-205ENST00000523147 558 ntTSL 523.34■■□□□ 1.332e-6■□□□□ 10.8
XRCC6P12956 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.66■■□□□ 1.222e-6■□□□□ 10.8
XRCC6P12956 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.082e-6■□□□□ 10.8
XRCC6P12956 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.992e-6■□□□□ 10.8
XRCC6P12956 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.86■□□□□ 0.932e-6■□□□□ 10.8
XRCC6P12956 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.52e-6■□□□□ 10.8
Retrieved 100 of 6,788 protein–RNA pairs in 44.4 ms