Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SLC7A5P2-201ENST00000553010 536 ntBASIC25.21■■□□□ 1.63
APPP05067 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.21■■□□□ 1.63
APPP05067 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
APPP05067 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
APPP05067 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
APPP05067 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
APPP05067 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
APPP05067 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.2■■□□□ 1.63
APPP05067 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
APPP05067 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.2■■□□□ 1.62
APPP05067 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 KRT18P11-201ENST00000435214 1283 ntBASIC25.2■■□□□ 1.62
APPP05067 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.2■■□□□ 1.62
APPP05067 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.2■■□□□ 1.62
APPP05067 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.2■■□□□ 1.62
APPP05067 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
APPP05067 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
APPP05067 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
APPP05067 AC061975.6-201ENST00000579045 1553 ntBASIC25.19■■□□□ 1.62
APPP05067 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
APPP05067 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.19■■□□□ 1.62
APPP05067 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
APPP05067 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.19■■□□□ 1.62
APPP05067 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.19■■□□□ 1.62
APPP05067 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
APPP05067 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.19■■□□□ 1.62
APPP05067 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
APPP05067 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
APPP05067 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
APPP05067 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
APPP05067 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.18■■□□□ 1.62
APPP05067 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC25.18■■□□□ 1.62
APPP05067 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
APPP05067 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
APPP05067 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
APPP05067 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
APPP05067 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.18■■□□□ 1.62
APPP05067 KRT18P20-201ENST00000548986 1279 ntBASIC25.18■■□□□ 1.62
APPP05067 BID-214ENST00000617586 542 ntTSL 5 BASIC25.18■■□□□ 1.62
APPP05067 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
APPP05067 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
APPP05067 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.17■■□□□ 1.62
APPP05067 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 AC120498.10-201ENST00000621827 505 ntBASIC25.17■■□□□ 1.62
APPP05067 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.17■■□□□ 1.62
APPP05067 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
APPP05067 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.16■■□□□ 1.62
APPP05067 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.16■■□□□ 1.62
APPP05067 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
APPP05067 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 POU5F1P4-201ENST00000413175 1085 ntBASIC25.16■■□□□ 1.62
APPP05067 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.16■■□□□ 1.62
APPP05067 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 AC011767.1-201ENST00000617410 1153 ntBASIC25.16■■□□□ 1.62
APPP05067 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
APPP05067 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
APPP05067 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.16■■□□□ 1.62
APPP05067 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.16■■□□□ 1.62
APPP05067 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
APPP05067 LINC00565-201ENST00000562710 2331 ntBASIC25.15■■□□□ 1.62
APPP05067 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.15■■□□□ 1.62
APPP05067 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
APPP05067 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
APPP05067 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
APPP05067 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms