Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.82■□□□□ 0.44
CD3DP04234 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.82■□□□□ 0.44
CD3DP04234 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.82■□□□□ 0.44
CD3DP04234 AC003102.1-202ENST00000563394 1796 ntBASIC17.82■□□□□ 0.44
CD3DP04234 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CD3DP04234 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CD3DP04234 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.82■□□□□ 0.44
CD3DP04234 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CD3DP04234 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD3DP04234 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CD3DP04234 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CD3DP04234 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.82■□□□□ 0.44
CD3DP04234 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 KRT8P33-201ENST00000508125 1423 ntBASIC17.81■□□□□ 0.44
CD3DP04234 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.81■□□□□ 0.44
CD3DP04234 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.81■□□□□ 0.44
CD3DP04234 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.81■□□□□ 0.44
CD3DP04234 YBX1P4-201ENST00000392794 808 ntBASIC17.81■□□□□ 0.44
CD3DP04234 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.81■□□□□ 0.44
CD3DP04234 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD3DP04234 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.8■□□□□ 0.44
CD3DP04234 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.8■□□□□ 0.44
CD3DP04234 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CD3DP04234 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.8■□□□□ 0.44
CD3DP04234 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.8■□□□□ 0.44
CD3DP04234 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
CD3DP04234 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD3DP04234 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.79■□□□□ 0.44
CD3DP04234 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.79■□□□□ 0.44
CD3DP04234 AL451085.2-201ENST00000605085 799 ntBASIC17.79■□□□□ 0.44
CD3DP04234 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.79■□□□□ 0.44
CD3DP04234 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD3DP04234 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.79■□□□□ 0.44
CD3DP04234 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CD3DP04234 AC027702.1-201ENST00000563810 1770 ntBASIC17.79■□□□□ 0.44
CD3DP04234 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD3DP04234 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 AC133637.1-201ENST00000624115 1537 ntBASIC17.78■□□□□ 0.44
CD3DP04234 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.78■□□□□ 0.44
CD3DP04234 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.78■□□□□ 0.44
CD3DP04234 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.78■□□□□ 0.44
CD3DP04234 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.78■□□□□ 0.44
CD3DP04234 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CD3DP04234 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD3DP04234 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD3DP04234 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.77■□□□□ 0.44
CD3DP04234 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD3DP04234 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD3DP04234 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.77■□□□□ 0.44
CD3DP04234 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CD3DP04234 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.77■□□□□ 0.44
CD3DP04234 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD3DP04234 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CD3DP04234 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.77■□□□□ 0.44
CD3DP04234 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD3DP04234 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.77■□□□□ 0.44
CD3DP04234 AL031848.2-201ENST00000607670 837 ntBASIC17.77■□□□□ 0.44
CD3DP04234 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.77■□□□□ 0.44
CD3DP04234 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD3DP04234 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD3DP04234 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CD3DP04234 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.77■□□□□ 0.43
CD3DP04234 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD3DP04234 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms