Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
APOA1P02647 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA1P02647 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA1P02647 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
APOA1P02647 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
APOA1P02647 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
APOA1P02647 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
APOA1P02647 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
APOA1P02647 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
APOA1P02647 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
APOA1P02647 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
APOA1P02647 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
APOA1P02647 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA1P02647 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
APOA1P02647 AC120024.1-201ENST00000562672 995 ntBASIC18.68■□□□□ 0.58
APOA1P02647 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA1P02647 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
APOA1P02647 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
APOA1P02647 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.68■□□□□ 0.58
APOA1P02647 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA1P02647 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA1P02647 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOA1P02647 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
APOA1P02647 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOA1P02647 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOA1P02647 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
APOA1P02647 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.67■□□□□ 0.58
APOA1P02647 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.67■□□□□ 0.58
APOA1P02647 MIR7108-201ENST00000614319 87 ntBASIC18.67■□□□□ 0.58
APOA1P02647 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
APOA1P02647 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA1P02647 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
APOA1P02647 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOA1P02647 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 AC018445.3-201ENST00000624177 1945 ntBASIC18.66■□□□□ 0.58
APOA1P02647 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
APOA1P02647 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA1P02647 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
APOA1P02647 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.66■□□□□ 0.58
APOA1P02647 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.66■□□□□ 0.58
APOA1P02647 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 PCDHAC2-203ENST00000615316 3011 ntBASIC18.66■□□□□ 0.58
APOA1P02647 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
APOA1P02647 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA1P02647 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.66■□□□□ 0.58
APOA1P02647 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA1P02647 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 OXCT2P1-201ENST00000447263 1535 ntBASIC18.65■□□□□ 0.58
APOA1P02647 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.65■□□□□ 0.58
APOA1P02647 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.65■□□□□ 0.58
APOA1P02647 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms