Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LTAP01374 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LTAP01374 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LTAP01374 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.83■□□□□ 0.13
LTAP01374 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LTAP01374 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LTAP01374 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.83■□□□□ 0.12
LTAP01374 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LTAP01374 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.83■□□□□ 0.12
LTAP01374 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.83■□□□□ 0.12
LTAP01374 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.83■□□□□ 0.12
LTAP01374 pRNA.6-201ENST00000610482 90 ntBASIC15.83■□□□□ 0.12
LTAP01374 pRNA.5-201ENST00000612139 90 ntBASIC15.83■□□□□ 0.12
LTAP01374 pRNA.11-201ENST00000618423 90 ntBASIC15.83■□□□□ 0.12
LTAP01374 pRNA.13-201ENST00000619112 90 ntBASIC15.83■□□□□ 0.12
LTAP01374 AL117332.1-201ENST00000622628 974 ntBASIC15.83■□□□□ 0.12
LTAP01374 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.83■□□□□ 0.12
LTAP01374 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LTAP01374 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.82■□□□□ 0.12
LTAP01374 AC027702.1-201ENST00000563810 1770 ntBASIC15.82■□□□□ 0.12
LTAP01374 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.82■□□□□ 0.12
LTAP01374 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LTAP01374 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LTAP01374 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LTAP01374 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
LTAP01374 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LTAP01374 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LTAP01374 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LTAP01374 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LTAP01374 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LTAP01374 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LTAP01374 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LTAP01374 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
LTAP01374 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 OR2I1P-207ENST00000453522 948 ntBASIC15.81■□□□□ 0.12
LTAP01374 AP004607.7-201ENST00000527152 1677 ntBASIC15.81■□□□□ 0.12
LTAP01374 KRT125P-201ENST00000546827 989 ntBASIC15.81■□□□□ 0.12
LTAP01374 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.81■□□□□ 0.12
LTAP01374 AC010997.5-201ENST00000609182 354 ntBASIC15.81■□□□□ 0.12
LTAP01374 AC020907.5-201ENST00000624372 1936 ntBASIC15.81■□□□□ 0.12
LTAP01374 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LTAP01374 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.8■□□□□ 0.12
LTAP01374 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LTAP01374 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.8■□□□□ 0.12
LTAP01374 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.8■□□□□ 0.12
LTAP01374 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LTAP01374 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.8■□□□□ 0.12
LTAP01374 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.8■□□□□ 0.12
LTAP01374 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LTAP01374 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.8■□□□□ 0.12
LTAP01374 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LTAP01374 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
LTAP01374 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LTAP01374 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.8■□□□□ 0.12
LTAP01374 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.8■□□□□ 0.12
LTAP01374 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.8■□□□□ 0.12
LTAP01374 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LTAP01374 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LTAP01374 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.79■□□□□ 0.12
LTAP01374 AC006455.2-201ENST00000429931 906 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms