Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBL3O95164 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL3O95164 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL3O95164 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBL3O95164 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL3O95164 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBL3O95164 BX005040.4-201ENST00000637145 1518 ntBASIC18.79■□□□□ 0.6
UBL3O95164 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBL3O95164 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.79■□□□□ 0.6
UBL3O95164 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.79■□□□□ 0.6
UBL3O95164 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBL3O95164 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UBL3O95164 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBL3O95164 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
UBL3O95164 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBL3O95164 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
UBL3O95164 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
UBL3O95164 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 AC009237.3-201ENST00000393279 1427 ntBASIC18.78■□□□□ 0.6
UBL3O95164 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBL3O95164 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBL3O95164 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 AC027612.3-201ENST00000413684 1047 ntBASIC18.78■□□□□ 0.6
UBL3O95164 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.78■□□□□ 0.6
UBL3O95164 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 FEM1AP4-201ENST00000443167 1987 ntBASIC18.78■□□□□ 0.6
UBL3O95164 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.78■□□□□ 0.6
UBL3O95164 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBL3O95164 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.78■□□□□ 0.6
UBL3O95164 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBL3O95164 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBL3O95164 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL3O95164 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBL3O95164 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.77■□□□□ 0.6
UBL3O95164 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBL3O95164 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL3O95164 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UBL3O95164 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.77■□□□□ 0.6
UBL3O95164 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBL3O95164 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.77■□□□□ 0.6
UBL3O95164 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UBL3O95164 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.77■□□□□ 0.6
UBL3O95164 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
UBL3O95164 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UBL3O95164 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.77■□□□□ 0.59
UBL3O95164 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBL3O95164 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.77■□□□□ 0.59
UBL3O95164 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UBL3O95164 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.76■□□□□ 0.59
UBL3O95164 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.76■□□□□ 0.59
UBL3O95164 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
UBL3O95164 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.76■□□□□ 0.59
UBL3O95164 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 MIR6084-201ENST00000622012 110 ntBASIC18.76■□□□□ 0.59
UBL3O95164 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBL3O95164 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.75■□□□□ 0.59
UBL3O95164 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
UBL3O95164 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL3O95164 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
UBL3O95164 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL3O95164 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.74■□□□□ 0.59
UBL3O95164 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 AF106564.1-201ENST00000607058 2553 ntBASIC18.74■□□□□ 0.59
UBL3O95164 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.74■□□□□ 0.59
UBL3O95164 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL3O95164 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms