Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPXO76031 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPXO76031 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CLPXO76031 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPXO76031 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPXO76031 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPXO76031 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.02■□□□□ 0.63
CLPXO76031 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLPXO76031 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.01■□□□□ 0.63
CLPXO76031 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPXO76031 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPXO76031 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.01■□□□□ 0.63
CLPXO76031 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPXO76031 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLPXO76031 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.01■□□□□ 0.63
CLPXO76031 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPXO76031 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPXO76031 AC019069.1-201ENST00000610008 1333 ntBASIC19■□□□□ 0.63
CLPXO76031 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19■□□□□ 0.63
CLPXO76031 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19■□□□□ 0.63
CLPXO76031 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19■□□□□ 0.63
CLPXO76031 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19■□□□□ 0.63
CLPXO76031 AC239859.2-201ENST00000444165 318 ntBASIC19■□□□□ 0.63
CLPXO76031 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19■□□□□ 0.63
CLPXO76031 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLPXO76031 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19■□□□□ 0.63
CLPXO76031 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19■□□□□ 0.63
CLPXO76031 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19■□□□□ 0.63
CLPXO76031 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19■□□□□ 0.63
CLPXO76031 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLPXO76031 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPXO76031 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.99■□□□□ 0.63
CLPXO76031 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPXO76031 AL049796.1-201ENST00000565336 1766 ntBASIC18.99■□□□□ 0.63
CLPXO76031 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.99■□□□□ 0.63
CLPXO76031 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPXO76031 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 CA15P2-201ENST00000611168 834 ntBASIC18.99■□□□□ 0.63
CLPXO76031 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLPXO76031 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLPXO76031 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 AC026471.1-201ENST00000564629 3026 ntBASIC18.99■□□□□ 0.63
CLPXO76031 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLPXO76031 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLPXO76031 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPXO76031 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLPXO76031 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLPXO76031 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CLPXO76031 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CLPXO76031 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLPXO76031 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLPXO76031 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
CLPXO76031 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLPXO76031 AF131216.4-201ENST00000638924 1588 ntBASIC18.98■□□□□ 0.63
CLPXO76031 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLPXO76031 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLPXO76031 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPXO76031 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLPXO76031 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPXO76031 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPXO76031 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CLPXO76031 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPXO76031 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.97■□□□□ 0.63
CLPXO76031 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPXO76031 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CLPXO76031 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPXO76031 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPXO76031 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.97■□□□□ 0.63
CLPXO76031 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms