Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ZNF253O75346 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF253O75346 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF253O75346 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ZNF253O75346 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF253O75346 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF253O75346 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF253O75346 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF253O75346 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF253O75346 AL034346.1-201ENST00000568244 1277 ntBASIC16.27■□□□□ 0.2
ZNF253O75346 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF253O75346 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF253O75346 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF253O75346 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF253O75346 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF253O75346 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF253O75346 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ZNF253O75346 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
ZNF253O75346 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF253O75346 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 AC006455.2-201ENST00000429931 906 ntBASIC16.26■□□□□ 0.19
ZNF253O75346 AC010141.3-201ENST00000456659 717 ntBASIC16.26■□□□□ 0.19
ZNF253O75346 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF253O75346 FEM1AP4-201ENST00000443167 1987 ntBASIC16.26■□□□□ 0.19
ZNF253O75346 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ZNF253O75346 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF253O75346 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF253O75346 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF253O75346 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF253O75346 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF253O75346 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
ZNF253O75346 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF253O75346 KRT16P3-201ENST00000439127 1283 ntBASIC16.25■□□□□ 0.19
ZNF253O75346 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF253O75346 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.25■□□□□ 0.19
ZNF253O75346 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF253O75346 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 AL356740.2-201ENST00000601559 647 ntBASIC16.25■□□□□ 0.19
ZNF253O75346 AC099791.2-201ENST00000605725 427 ntBASIC16.25■□□□□ 0.19
ZNF253O75346 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF253O75346 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF253O75346 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ZNF253O75346 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF253O75346 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 OXCT2P1-201ENST00000447263 1535 ntBASIC16.24■□□□□ 0.19
ZNF253O75346 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF253O75346 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF253O75346 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF253O75346 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF253O75346 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF253O75346 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF253O75346 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF253O75346 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF253O75346 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF253O75346 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF253O75346 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF253O75346 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms