Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCMT2O60294 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
LCMT2O60294 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCMT2O60294 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.16■□□□□ 0.82
LCMT2O60294 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCMT2O60294 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
LCMT2O60294 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.16■□□□□ 0.82
LCMT2O60294 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCMT2O60294 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCMT2O60294 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.15■□□□□ 0.82
LCMT2O60294 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.15■□□□□ 0.82
LCMT2O60294 KRT19P1-201ENST00000405746 1186 ntBASIC20.15■□□□□ 0.82
LCMT2O60294 AC010141.2-201ENST00000452426 721 ntBASIC20.15■□□□□ 0.82
LCMT2O60294 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.15■□□□□ 0.82
LCMT2O60294 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LCMT2O60294 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
LCMT2O60294 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCMT2O60294 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.14■□□□□ 0.82
LCMT2O60294 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.14■□□□□ 0.81
LCMT2O60294 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCMT2O60294 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.14■□□□□ 0.81
LCMT2O60294 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LCMT2O60294 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCMT2O60294 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.14■□□□□ 0.81
LCMT2O60294 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.14■□□□□ 0.81
LCMT2O60294 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.14■□□□□ 0.81
LCMT2O60294 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LCMT2O60294 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCMT2O60294 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.14■□□□□ 0.81
LCMT2O60294 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCMT2O60294 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCMT2O60294 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LCMT2O60294 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
LCMT2O60294 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCMT2O60294 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCMT2O60294 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.13■□□□□ 0.81
LCMT2O60294 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LCMT2O60294 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.13■□□□□ 0.81
LCMT2O60294 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCMT2O60294 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LCMT2O60294 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.12■□□□□ 0.81
LCMT2O60294 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 SLC7A5P2-201ENST00000553010 536 ntBASIC20.12■□□□□ 0.81
LCMT2O60294 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.12■□□□□ 0.81
LCMT2O60294 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.12■□□□□ 0.81
LCMT2O60294 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCMT2O60294 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
LCMT2O60294 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.11■□□□□ 0.81
LCMT2O60294 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCMT2O60294 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LCMT2O60294 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCMT2O60294 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LCMT2O60294 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.11■□□□□ 0.81
LCMT2O60294 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.11■□□□□ 0.81
LCMT2O60294 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
LCMT2O60294 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.11■□□□□ 0.81
LCMT2O60294 AC008175.2-201ENST00000612840 297 ntBASIC20.11■□□□□ 0.81
LCMT2O60294 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCMT2O60294 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LCMT2O60294 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LCMT2O60294 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCMT2O60294 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCMT2O60294 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.1■□□□□ 0.81
LCMT2O60294 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.1■□□□□ 0.81
LCMT2O60294 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCMT2O60294 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.1■□□□□ 0.81
LCMT2O60294 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.1■□□□□ 0.81
LCMT2O60294 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.1■□□□□ 0.81
LCMT2O60294 AC022517.1-201ENST00000592429 346 ntBASIC20.1■□□□□ 0.81
LCMT2O60294 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.1■□□□□ 0.81
LCMT2O60294 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCMT2O60294 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCMT2O60294 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LCMT2O60294 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LCMT2O60294 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 POU5F1P4-201ENST00000413175 1085 ntBASIC20.09■□□□□ 0.81
LCMT2O60294 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.09■□□□□ 0.81
LCMT2O60294 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.09■□□□□ 0.81
LCMT2O60294 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.09■□□□□ 0.81
LCMT2O60294 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.09■□□□□ 0.81
LCMT2O60294 AL024507.2-201ENST00000606070 2574 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms