Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.29■□□□□ 0.2
PDE6DO43924 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 SMG8-203ENST00000578922 2178 ntBASIC16.29■□□□□ 0.2
PDE6DO43924 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PDE6DO43924 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6DO43924 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6DO43924 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6DO43924 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6DO43924 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6DO43924 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDE6DO43924 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.28■□□□□ 0.2
PDE6DO43924 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.28■□□□□ 0.2
PDE6DO43924 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDE6DO43924 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDE6DO43924 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDE6DO43924 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.28■□□□□ 0.2
PDE6DO43924 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDE6DO43924 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PDE6DO43924 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6DO43924 BX323043.1-201ENST00000641006 1765 ntBASIC16.28■□□□□ 0.2
PDE6DO43924 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.27■□□□□ 0.2
PDE6DO43924 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDE6DO43924 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6DO43924 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PDE6DO43924 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.27■□□□□ 0.2
PDE6DO43924 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6DO43924 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6DO43924 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.27■□□□□ 0.2
PDE6DO43924 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.27■□□□□ 0.2
PDE6DO43924 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDE6DO43924 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDE6DO43924 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6DO43924 AC018445.3-201ENST00000624177 1945 ntBASIC16.27■□□□□ 0.19
PDE6DO43924 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
PDE6DO43924 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
PDE6DO43924 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6DO43924 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6DO43924 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.27■□□□□ 0.19
PDE6DO43924 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDE6DO43924 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6DO43924 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PDE6DO43924 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6DO43924 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.26■□□□□ 0.19
PDE6DO43924 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.26■□□□□ 0.19
PDE6DO43924 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDE6DO43924 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 AC020907.5-201ENST00000624372 1936 ntBASIC16.25■□□□□ 0.19
PDE6DO43924 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.25■□□□□ 0.19
PDE6DO43924 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.25■□□□□ 0.19
PDE6DO43924 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms