Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.24■□□□□ 0.83
SPTBN2O15020 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.24■□□□□ 0.83
SPTBN2O15020 MIR6786-201ENST00000616843 113 ntBASIC20.24■□□□□ 0.83
SPTBN2O15020 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SPTBN2O15020 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SPTBN2O15020 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SPTBN2O15020 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 AC124016.1-201ENST00000609552 612 ntBASIC20.24■□□□□ 0.83
SPTBN2O15020 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.24■□□□□ 0.83
SPTBN2O15020 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN2O15020 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SPTBN2O15020 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTBN2O15020 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTBN2O15020 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.23■□□□□ 0.83
SPTBN2O15020 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.23■□□□□ 0.83
SPTBN2O15020 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTBN2O15020 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTBN2O15020 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SPTBN2O15020 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.23■□□□□ 0.83
SPTBN2O15020 KRT8P9-201ENST00000558927 1449 ntBASIC20.23■□□□□ 0.83
SPTBN2O15020 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTBN2O15020 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 AL023875.1-201ENST00000640777 796 ntBASIC20.23■□□□□ 0.83
SPTBN2O15020 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 AC092368.3-202ENST00000574180 1591 ntBASIC20.23■□□□□ 0.83
SPTBN2O15020 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN2O15020 AP004607.7-201ENST00000527152 1677 ntBASIC20.22■□□□□ 0.83
SPTBN2O15020 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN2O15020 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.22■□□□□ 0.83
SPTBN2O15020 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTBN2O15020 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN2O15020 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN2O15020 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTBN2O15020 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTBN2O15020 RARRES2P10-201ENST00000564312 460 ntBASIC20.22■□□□□ 0.83
SPTBN2O15020 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTBN2O15020 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.22■□□□□ 0.83
SPTBN2O15020 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SPTBN2O15020 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTBN2O15020 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTBN2O15020 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SPTBN2O15020 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTBN2O15020 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTBN2O15020 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SPTBN2O15020 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SPTBN2O15020 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPTBN2O15020 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTBN2O15020 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTBN2O15020 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN2O15020 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
SPTBN2O15020 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTBN2O15020 AL589743.5-201ENST00000616611 1050 ntBASIC20.2■□□□□ 0.82
SPTBN2O15020 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SPTBN2O15020 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTBN2O15020 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTBN2O15020 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN2O15020 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN2O15020 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTBN2O15020 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN2O15020 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTBN2O15020 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.19■□□□□ 0.82
SPTBN2O15020 AC113410.3-201ENST00000623366 203 ntBASIC20.19■□□□□ 0.82
SPTBN2O15020 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN2O15020 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms