Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDC7O00311 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC7O00311 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDC7O00311 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 IRS3P-201ENST00000223076 1006 ntBASIC20.63■□□□□ 0.89
CDC7O00311 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC7O00311 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC7O00311 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CDC7O00311 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDC7O00311 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC7O00311 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDC7O00311 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC7O00311 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC7O00311 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDC7O00311 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC7O00311 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.62■□□□□ 0.89
CDC7O00311 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC7O00311 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC7O00311 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC7O00311 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CDC7O00311 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC7O00311 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC7O00311 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC7O00311 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC7O00311 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDC7O00311 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC7O00311 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.61■□□□□ 0.89
CDC7O00311 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC7O00311 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC7O00311 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDC7O00311 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC7O00311 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC7O00311 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CDC7O00311 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC7O00311 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC7O00311 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC7O00311 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC7O00311 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC7O00311 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC7O00311 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDC7O00311 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC7O00311 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC7O00311 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC7O00311 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC7O00311 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDC7O00311 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDC7O00311 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC7O00311 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC7O00311 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CDC7O00311 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDC7O00311 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC7O00311 EEF1DP3-203ENST00000566025 782 ntBASIC20.58■□□□□ 0.89
CDC7O00311 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC7O00311 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CDC7O00311 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.58■□□□□ 0.88
CDC7O00311 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.58■□□□□ 0.88
CDC7O00311 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC7O00311 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.58■□□□□ 0.88
CDC7O00311 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC7O00311 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDC7O00311 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC7O00311 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC7O00311 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC7O00311 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC7O00311 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDC7O00311 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms