Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.23■□□□□ 0.99
AP3B1O00203 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
AP3B1O00203 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP3B1O00203 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.23■□□□□ 0.99
AP3B1O00203 AC053503.5-201ENST00000601508 636 ntBASIC21.23■□□□□ 0.99
AP3B1O00203 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP3B1O00203 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP3B1O00203 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP3B1O00203 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP3B1O00203 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
AP3B1O00203 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.23■□□□□ 0.99
AP3B1O00203 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.22■□□□□ 0.99
AP3B1O00203 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
AP3B1O00203 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
AP3B1O00203 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.22■□□□□ 0.99
AP3B1O00203 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.22■□□□□ 0.99
AP3B1O00203 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
AP3B1O00203 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.22■□□□□ 0.99
AP3B1O00203 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP3B1O00203 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3B1O00203 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.21■□□□□ 0.99
AP3B1O00203 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.21■□□□□ 0.99
AP3B1O00203 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.21■□□□□ 0.99
AP3B1O00203 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
AP3B1O00203 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP3B1O00203 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
AP3B1O00203 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3B1O00203 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.2■□□□□ 0.98
AP3B1O00203 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP3B1O00203 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3B1O00203 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP3B1O00203 EEF1DP3-203ENST00000566025 782 ntBASIC21.2■□□□□ 0.98
AP3B1O00203 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3B1O00203 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP3B1O00203 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.2■□□□□ 0.98
AP3B1O00203 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
AP3B1O00203 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
AP3B1O00203 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.19■□□□□ 0.98
AP3B1O00203 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.19■□□□□ 0.98
AP3B1O00203 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.19■□□□□ 0.98
AP3B1O00203 TPRG1LP1-201ENST00000598702 760 ntBASIC21.19■□□□□ 0.98
AP3B1O00203 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.19■□□□□ 0.98
AP3B1O00203 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP3B1O00203 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.19■□□□□ 0.98
AP3B1O00203 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
AP3B1O00203 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
AP3B1O00203 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
AP3B1O00203 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.18■□□□□ 0.98
AP3B1O00203 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
AP3B1O00203 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.18■□□□□ 0.98
AP3B1O00203 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
AP3B1O00203 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
AP3B1O00203 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
AP3B1O00203 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP3B1O00203 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3B1O00203 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 IRS3P-201ENST00000223076 1006 ntBASIC21.17■□□□□ 0.98
AP3B1O00203 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 AC005837.3-201ENST00000612163 286 ntBASIC21.17■□□□□ 0.98
AP3B1O00203 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3B1O00203 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP3B1O00203 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms