Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 AC092053.2-201ENST00000640557 1818 ntBASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 MIR6089-201ENST00000616698 64 ntBASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHKB-CPT1BH3BT56 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 ADM-207ENST00000530439 1839 ntTSL 2 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 AC110285.7-201ENST00000624417 1536 ntBASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 HLA-L-211ENST00000482052 1765 ntBASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHKB-CPT1BH3BT56 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHKB-CPT1BH3BT56 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC11.72□□□□□ -0.53
CHKB-CPT1BH3BT56 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms