Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 AC099791.1-201ENST00000416440 715 ntBASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.37■□□□□ 0.69
CPSF4LA6NMK7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 PBX2P1-201ENST00000493219 1291 ntBASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPSF4LA6NMK7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 AL157384.1-201ENST00000445995 2473 ntBASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPSF4LA6NMK7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 TSPY26P-201ENST00000476365 1326 ntBASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPSF4LA6NMK7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPSF4LA6NMK7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 AC027682.1-201ENST00000562846 899 ntBASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 AC105233.4-201ENST00000642045 216 ntBASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPSF4LA6NMK7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPSF4LA6NMK7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms