Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 KRT125P-201ENST00000546827 989 ntBASIC21.47■■□□□ 1.03
SMIM23A6NLE4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 AFG3L1P-217ENST00000557444 2447 ntBASIC21.47■■□□□ 1.03
SMIM23A6NLE4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM23A6NLE4 AC073314.1-201ENST00000568729 2216 ntBASIC21.47■■□□□ 1.03
SMIM23A6NLE4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.46■■□□□ 1.03
SMIM23A6NLE4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 AC006455.2-201ENST00000429931 906 ntBASIC21.45■■□□□ 1.02
SMIM23A6NLE4 TSPY9P-201ENST00000440215 945 ntBASIC21.45■■□□□ 1.02
SMIM23A6NLE4 TSPY11P-201ENST00000442607 1045 ntBASIC21.45■■□□□ 1.02
SMIM23A6NLE4 AC010997.5-201ENST00000609182 354 ntBASIC21.45■■□□□ 1.02
SMIM23A6NLE4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMIM23A6NLE4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 pRNA.6-201ENST00000610482 90 ntBASIC21.44■■□□□ 1.02
SMIM23A6NLE4 pRNA.5-201ENST00000612139 90 ntBASIC21.44■■□□□ 1.02
SMIM23A6NLE4 pRNA.11-201ENST00000618423 90 ntBASIC21.44■■□□□ 1.02
SMIM23A6NLE4 pRNA.13-201ENST00000619112 90 ntBASIC21.44■■□□□ 1.02
SMIM23A6NLE4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM23A6NLE4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 AL117332.1-201ENST00000622628 974 ntBASIC21.43■■□□□ 1.02
SMIM23A6NLE4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM23A6NLE4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 AP005212.1-201ENST00000581547 1997 ntBASIC21.42■■□□□ 1.02
SMIM23A6NLE4 MIR4787-201ENST00000607364 84 ntBASIC21.42■■□□□ 1.02
SMIM23A6NLE4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.42■■□□□ 1.02
SMIM23A6NLE4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM23A6NLE4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM23A6NLE4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SMIM23A6NLE4 AC003102.1-202ENST00000563394 1796 ntBASIC21.41■■□□□ 1.02
SMIM23A6NLE4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.41■■□□□ 1.02
SMIM23A6NLE4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms