Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCP4L1A6NKN8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 AC112907.3-201ENST00000577781 2400 ntBASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCP4L1A6NKN8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.58■□□□□ 0.25
PCP4L1A6NKN8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 AC010542.4-201ENST00000563151 1910 ntBASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 AC139713.2-201ENST00000641328 2723 ntBASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCP4L1A6NKN8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCP4L1A6NKN8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 AL391005.1-201ENST00000623953 2435 ntBASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCP4L1A6NKN8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCP4L1A6NKN8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCP4L1A6NKN8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCP4L1A6NKN8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms