Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.6■□□□□ 0.25
RBFOX3A6NFN3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RBFOX3A6NFN3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RBFOX3A6NFN3 AC112907.3-201ENST00000577781 2400 ntBASIC16.58■□□□□ 0.25
RBFOX3A6NFN3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
RBFOX3A6NFN3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RBFOX3A6NFN3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RBFOX3A6NFN3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 AC027702.1-201ENST00000563810 1770 ntBASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 AC004687.1-201ENST00000579003 1625 ntBASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 AC020907.5-201ENST00000624372 1936 ntBASIC16.57■□□□□ 0.24
RBFOX3A6NFN3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
RBFOX3A6NFN3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms