Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.45■□□□□ 0.7
SH3D21A4FU49 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SH3D21A4FU49 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.45■□□□□ 0.7
SH3D21A4FU49 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SH3D21A4FU49 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.44■□□□□ 0.7
SH3D21A4FU49 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SH3D21A4FU49 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3D21A4FU49 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 OXCT2P1-201ENST00000447263 1535 ntBASIC19.43■□□□□ 0.7
SH3D21A4FU49 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 MIR572-201ENST00000384983 95 ntBASIC19.43■□□□□ 0.7
SH3D21A4FU49 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3D21A4FU49 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3D21A4FU49 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 AC027612.3-201ENST00000413684 1047 ntBASIC19.42■□□□□ 0.7
SH3D21A4FU49 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH3D21A4FU49 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SH3D21A4FU49 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 OR2I1P-207ENST00000453522 948 ntBASIC19.41■□□□□ 0.7
SH3D21A4FU49 AC012414.1-201ENST00000556676 535 ntBASIC19.41■□□□□ 0.7
SH3D21A4FU49 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3D21A4FU49 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3D21A4FU49 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.4■□□□□ 0.7
SH3D21A4FU49 AL354811.1-201ENST00000610286 706 ntBASIC19.4■□□□□ 0.7
SH3D21A4FU49 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.4■□□□□ 0.7
SH3D21A4FU49 MIR6084-201ENST00000622012 110 ntBASIC19.4■□□□□ 0.7
SH3D21A4FU49 AL031602.1-201ENST00000633169 911 ntBASIC19.4■□□□□ 0.7
SH3D21A4FU49 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.4■□□□□ 0.7
SH3D21A4FU49 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3D21A4FU49 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.39■□□□□ 0.7
SH3D21A4FU49 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH3D21A4FU49 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms