Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 SYT6-210ENST00000641643 1587 ntBASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-5A0A0J9YX44 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 AC121338.2-201ENST00000622535 1744 ntBASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 GUSBP5-201ENST00000418136 578 ntBASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 DUX4L19-201ENST00000557448 1267 ntBASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 SMUG1P1-201ENST00000590640 811 ntBASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 AC027702.1-201ENST00000563810 1770 ntBASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV5-5A0A0J9YX44 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRBV5-5A0A0J9YX44 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-5A0A0J9YX44 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 AL035685.1-201ENST00000636663 812 ntBASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 AC007225.1-201ENST00000566331 1836 ntBASIC18.21■□□□□ 0.51
TRBV5-5A0A0J9YX44 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.5
TRBV5-5A0A0J9YX44 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV5-5A0A0J9YX44 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms