Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AC006128.1-201ENST00000624704 1661 ntBASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV4-1A0A0J9YWV2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 AC131281.2-201ENST00000520478 145 ntBASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV4-1A0A0J9YWV2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 AC073314.1-201ENST00000568729 2216 ntBASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 AP005212.1-201ENST00000581547 1997 ntBASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV4-1A0A0J9YWV2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV4-1A0A0J9YWV2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TRBV4-1A0A0J9YWV2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TRBV4-1A0A0J9YWV2 GABARAPL3-202ENST00000624044 1851 ntBASIC19.22■□□□□ 0.67
TRBV4-1A0A0J9YWV2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms