Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 BX005040.4-201ENST00000637145 1518 ntBASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV4A0A0C4DH28 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 AL354811.1-201ENST00000610286 706 ntBASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRGV4A0A0C4DH28 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV4A0A0C4DH28 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV4A0A0C4DH28 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV4A0A0C4DH28 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV4A0A0C4DH28 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV4A0A0C4DH28 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRGV4A0A0C4DH28 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 AC105265.2-201ENST00000467189 838 ntBASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 AC012414.1-201ENST00000556676 535 ntBASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 AC003102.1-202ENST00000563394 1796 ntBASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.05■□□□□ -0
TRGV4A0A0C4DH28 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.04■□□□□ -0
TRGV4A0A0C4DH28 AL358852.1-201ENST00000623174 1268 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms