Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV3A0A0B4J244 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 LINC01006-201ENST00000333319 2292 ntBASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV3A0A0B4J244 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV3A0A0B4J244 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV3A0A0B4J244 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV3A0A0B4J244 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV3A0A0B4J244 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.3
TRAV3A0A0B4J244 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 AC099791.1-201ENST00000416440 715 ntBASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 AC096631.2-201ENST00000436136 790 ntBASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV3A0A0B4J244 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 LINC01521-201ENST00000504184 1943 ntBASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 PBX2P1-201ENST00000493219 1291 ntBASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 TSPY26P-201ENST00000476365 1326 ntBASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 AC055733.4-201ENST00000638462 1354 ntBASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV3A0A0B4J244 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV3A0A0B4J244 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms