Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 OR10C1-204ENST00000622521 1039 ntBASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV5A0A0B4J1U4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 AL591742.1-201ENST00000604433 565 ntBASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 AC233723.2-201ENST00000623798 2106 ntBASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 GUSBP5-202ENST00000510805 1989 ntBASIC18.9■□□□□ 0.62
TRGV5A0A0B4J1U4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRGV5A0A0B4J1U4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRGV5A0A0B4J1U4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 AL138781.1-201ENST00000566567 1274 ntBASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRGV5A0A0B4J1U4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 MKRN4P-201ENST00000444706 1521 ntBASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV5A0A0B4J1U4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 AC245052.3-201ENST00000450182 901 ntBASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 AL162412.1-201ENST00000567129 965 ntBASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 AC016405.3-201ENST00000607710 860 ntBASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRGV5A0A0B4J1U4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 C11orf96-202ENST00000528572 1834 ntBASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 AL512625.2-201ENST00000417533 625 ntBASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.86■□□□□ 0.61
TRGV5A0A0B4J1U4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms