Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-1A0A0A6YYK1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC010141.3-201ENST00000456659 717 ntBASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC073314.1-201ENST00000568729 2216 ntBASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV8-1A0A0A6YYK1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 OR2I1P-207ENST00000453522 948 ntBASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 UNC93B8-201ENST00000511903 705 ntBASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MIR3181-201ENST00000578512 73 ntBASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV8-1A0A0A6YYK1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AP004607.7-201ENST00000527152 1677 ntBASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC009299.2-201ENST00000482477 511 ntBASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC010525.1-201ENST00000585559 441 ntBASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV8-1A0A0A6YYK1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 RARRES2P1-201ENST00000474487 481 ntBASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AP005212.1-201ENST00000581547 1997 ntBASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms