Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 AC024257.2-201ENST00000549699 147 ntBASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 AC131212.1-201ENST00000613771 668 ntBASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
TRAV30A0A087WSZ9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV30A0A087WSZ9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV30A0A087WSZ9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV30A0A087WSZ9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 AC008406.3-201ENST00000620001 1374 ntBASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV30A0A087WSZ9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV30A0A087WSZ9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 AC027682.1-201ENST00000562846 899 ntBASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV30A0A087WSZ9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms