Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV6A0A075B6T7 SMG8-203ENST00000578922 2178 ntBASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 MIR6765-201ENST00000614092 87 ntBASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 AC006128.1-201ENST00000624704 1661 ntBASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 AC018445.3-201ENST00000624177 1945 ntBASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV6A0A075B6T7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV6A0A075B6T7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 AC098818.2-201ENST00000564925 2320 ntBASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV6A0A075B6T7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV6A0A075B6T7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.96■□□□□ 0.46
TRAV6A0A075B6T7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.96■□□□□ 0.46
TRAV6A0A075B6T7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV6A0A075B6T7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV6A0A075B6T7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV6A0A075B6T7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms