Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 AC026366.1-201ENST00000488803 879 ntBASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 AC060766.5-201ENST00000590539 871 ntBASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC35.54■■■■□ 3.28
BIVM-ERCC5R4GMW8 AC093323.1-202ENST00000635031 2045 ntBASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC35.53■■■■□ 3.28
BIVM-ERCC5R4GMW8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC35.52■■■■□ 3.28
BIVM-ERCC5R4GMW8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC35.51■■■■□ 3.28
BIVM-ERCC5R4GMW8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
BIVM-ERCC5R4GMW8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
BIVM-ERCC5R4GMW8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC35.51■■■■□ 3.28
BIVM-ERCC5R4GMW8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC35.51■■■■□ 3.28
BIVM-ERCC5R4GMW8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC35.51■■■■□ 3.28
BIVM-ERCC5R4GMW8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC35.51■■■■□ 3.27
BIVM-ERCC5R4GMW8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 AL355472.2-201ENST00000422958 438 ntBASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 CYP2T3P-201ENST00000601990 817 ntBASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 AC128676.1-201ENST00000454392 318 ntBASIC35.5■■■■□ 3.27
BIVM-ERCC5R4GMW8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
BIVM-ERCC5R4GMW8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
BIVM-ERCC5R4GMW8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
BIVM-ERCC5R4GMW8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC35.48■■■■□ 3.27
BIVM-ERCC5R4GMW8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC35.48■■■■□ 3.27
BIVM-ERCC5R4GMW8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC35.48■■■■□ 3.27
BIVM-ERCC5R4GMW8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
BIVM-ERCC5R4GMW8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 AC100791.3-201ENST00000617619 330 ntBASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC35.46■■■■□ 3.27
BIVM-ERCC5R4GMW8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC35.45■■■■□ 3.27
BIVM-ERCC5R4GMW8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC35.45■■■■□ 3.27
BIVM-ERCC5R4GMW8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC35.45■■■■□ 3.27
BIVM-ERCC5R4GMW8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.26
BIVM-ERCC5R4GMW8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC35.44■■■■□ 3.26
BIVM-ERCC5R4GMW8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC35.43■■■■□ 3.26
BIVM-ERCC5R4GMW8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC35.43■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms