Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB9Q9Y5E1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 AC066615.1-201ENST00000640911 628 ntBASIC21.42■■□□□ 1.02
PCDHB9Q9Y5E1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB9Q9Y5E1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 TSPY20P-201ENST00000450910 630 ntBASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB9Q9Y5E1 AC079834.2-201ENST00000609776 1949 ntBASIC21.39■■□□□ 1.02
PCDHB9Q9Y5E1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB9Q9Y5E1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
PCDHB9Q9Y5E1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB9Q9Y5E1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 AC104187.1-201ENST00000607510 612 ntBASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 AL121832.2-201ENST00000610979 668 ntBASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.38■■□□□ 1.01
PCDHB9Q9Y5E1 FBXW4P1-201ENST00000426721 2239 ntBASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB9Q9Y5E1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms