Protein–RNA interactions for Protein: Q9H0E9

BRD8, Bromodomain-containing protein 8, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8Q9H0E9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD8Q9H0E9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 EEF1DP3-203ENST00000566025 782 ntBASIC21.61■■□□□ 1.05
BRD8Q9H0E9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD8Q9H0E9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 AC123595.1-201ENST00000440769 1046 ntBASIC21.6■■□□□ 1.05
BRD8Q9H0E9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 LINC02228-203ENST00000641970 1355 ntBASIC21.6■■□□□ 1.05
BRD8Q9H0E9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
BRD8Q9H0E9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD8Q9H0E9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
BRD8Q9H0E9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.58■■□□□ 1.04
BRD8Q9H0E9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRD8Q9H0E9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRD8Q9H0E9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 AC079140.4-201ENST00000507448 529 ntBASIC21.57■■□□□ 1.04
BRD8Q9H0E9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRD8Q9H0E9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 KRT87P-202ENST00000534226 1464 ntBASIC21.56■■□□□ 1.04
BRD8Q9H0E9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRD8Q9H0E9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRD8Q9H0E9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.55■■□□□ 1.04
BRD8Q9H0E9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.55■■□□□ 1.04
BRD8Q9H0E9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
BRD8Q9H0E9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms